Package: IBRtools 0.1.3
IBRtools: Integrating Biomarker-Based Assessments and Radarchart Creation
Several functions to calculate two important indexes (IBR (Integrated Biomarker Response) and IBRv2 (Integrated Biological Response version 2)), it also calculates the standardized values for enzyme activity for each index, and it has a graphing function to perform radarplots that make great data visualization for this type of data. Beliaeff, B., & Burgeot, T. (2002). <https://pubmed.ncbi.nlm.nih.gov/12069320/>. Sanchez, W., Burgeot, T., & Porcher, J.-M. (2013).<doi:10.1007/s11356-012-1359-1>. Devin, S., Burgeot, T., Giambérini, L., Minguez, L., & Pain-Devin, S. (2014). <doi:10.1007/s11356-013-2169-9>. Minato N. (2022). <https://minato.sip21c.org/msb/>.
Authors:
IBRtools_0.1.3.tar.gz
IBRtools_0.1.3.zip(r-4.7-any)IBRtools_0.1.3.zip(r-4.6-any)IBRtools_0.1.3.zip(r-4.5-any)
IBRtools_0.1.3.tgz(r-4.6-any)IBRtools_0.1.3.tgz(r-4.5-any)
IBRtools_0.1.3.tar.gz(r-4.7-any)IBRtools_0.1.3.tar.gz(r-4.6-any)
IBRtools_0.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
IBRtools/json (API)
| # Install 'IBRtools' in R: |
| install.packages('IBRtools', repos = c('https://ecologicaltools.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ecologicaltools/ibrtools/issues
- enzact - Biomarkers activity values with different treatments
- enzact_coef - Coefficient values for each biomarker within different treatments
- enzact2 - Biomarkers activity values with different treatments
data-visualizationdevtoolsenzyme-activityibribrvindexes-ibrintegrated-biomarker-responseradarchartrstudio-cloudstarplot
Last updated from:86451c5842. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | NOTE | 193 | ||
| source / vignettes | OK | 172 | ||
| linux-release | NOTE | 206 | ||
| macos-release | NOTE | 159 | ||
| macos-oldrel | NOTE | 170 | ||
| windows-devel | NOTE | 73 | ||
| windows-release | NOTE | 82 | ||
| windows-oldrel | NOTE | 69 | ||
| wasm-release | OK | 115 |
Exports:ibr_chartibr_indexibr_stdibrv2_bdiibrv2_chartibrv2_index
Dependencies:adliftbinhfclicpp11data.tabledplyrEbayesThreshfmsbgenericsgluegtoolslifecyclemagrittrMASSpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswavethreshwithr
