{
"_id": "6a101673acfb0bcc41c8462f",
"Package": "IBRtools",
"Title": "Integrating Biomarker-Based Assessments and Radarchart Creation",
"Version": "0.1.3",
"Authors@R": "c(person(given = \"Anna Carolina\",\nfamily = \"Resende\",\nrole = c(\"aut\", \"cre\"),\nemail = \"annac.resende@gmail.com\",\ncomment = c(\"https://orcid.org/0000-0003-0909-1255\")),\nperson(given = \"Diego\",\nfamily = \"Mauro Carneiro Pereira\",\nrole = c(\"aut\"),\nemail = \"diegom8135@gmail.com\",\ncomment = c(\"https://orcid.org/0000-0003-1554-3684\")))",
"Description": "Several functions to calculate two important indexes (IBR\n(Integrated Biomarker Response) and IBRv2 (Integrated\nBiological Response version 2)), it also calculates the\nstandardized values for enzyme activity for each index, and it\nhas a graphing function to perform radarplots that make great\ndata visualization for this type of data. Beliaeff, B., &\nBurgeot, T. (2002).\n. Sanchez, W.,\nBurgeot, T., & Porcher, J.-M.\n(2013).. Devin, S., Burgeot, T.,\nGiambérini, L., Minguez, L., & Pain-Devin, S. (2014).\n. Minato N. (2022).\n.",
"License": "GPL-3",
"Encoding": "UTF-8",
"LazyData": "true",
"Roxygen": "list(markdown = TRUE)",
"RoxygenNote": "7.2.3",
"SystemRequirements": "GNU make",
"Config/testthat/edition": "3",
"Config/pak/sysreqs": "make libicu-dev",
"Repository": "https://ecologicaltools.r-universe.dev",
"Date/Publication": "2023-08-14 08:37:40 UTC",
"RemoteUrl": "https://github.com/ecologicaltools/ibrtools",
"RemoteRef": "HEAD",
"RemoteSha": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"NeedsCompilation": "no",
"Packaged": {
"Date": "2026-05-14 07:15:17 UTC",
"User": "root"
},
"Author": "Anna Carolina Resende [aut, cre] (ORCID:\n),\nDiego Mauro Carneiro Pereira [aut] (ORCID:\n)",
"Maintainer": "Anna Carolina Resende ",
"MD5sum": "7226a96e5ccaf706dd6bcc859f25d026",
"_user": "ecologicaltools",
"_type": "src",
"_file": "IBRtools_0.1.3.tar.gz",
"_fileid": "e15cf7d7546d1976624f9393077bc0f7456cc5ff0e20f08da05d231d9b69404a",
"_filesize": 139256,
"_sha256": "e15cf7d7546d1976624f9393077bc0f7456cc5ff0e20f08da05d231d9b69404a",
"_created": "2026-05-14T07:15:17.000Z",
"_published": "2026-05-22T08:40:19.792Z",
"_distro": "noble",
"_jobs": [
{
"job": 77345454274,
"time": 154,
"config": "linux-devel-x86_64",
"r": "4.7.0",
"check": "OK",
"artifact": "6989249768"
},
{
"job": 77345454167,
"time": 131,
"config": "linux-release-x86_64",
"r": "4.6.0",
"check": "OK",
"artifact": "6989245701"
},
{
"job": 77345454085,
"time": 167,
"config": "macos-oldrel-arm64",
"r": "4.5.3",
"check": "OK",
"artifact": "7010890881"
},
{
"job": 77345453787,
"time": 142,
"config": "macos-release-arm64",
"r": "4.6.0",
"check": "OK",
"artifact": "7010799151"
},
{
"job": 77345453301,
"time": 159,
"config": "source",
"r": "4.6.0",
"check": "OK",
"artifact": "6989209313"
},
{
"job": 77345453470,
"time": 105,
"config": "wasm-release",
"r": "4.6.0",
"check": "OK",
"artifact": "7156358279"
},
{
"job": 77345453954,
"time": 80,
"config": "windows-devel",
"r": "4.7.0",
"check": "OK",
"artifact": "6989230628"
},
{
"job": 77345454133,
"time": 86,
"config": "windows-oldrel",
"r": "4.5.3",
"check": "OK",
"artifact": "6989232110"
},
{
"job": 77345454260,
"time": 87,
"config": "windows-release",
"r": "4.6.0",
"check": "OK",
"artifact": "6989232823"
}
],
"_buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780",
"_status": "success",
"_host": "GitHub-Actions",
"_upstream": "https://github.com/ecologicaltools/ibrtools",
"_commit": {
"id": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"author": "ecologicaltools ",
"committer": "ecologicaltools ",
"message": "Checking urls\n",
"time": 1692002260
},
"_maintainer": {
"name": "Anna Carolina Resende",
"email": "annac.resende@gmail.com",
"login": "ecologicaltools",
"uuid": 71520192,
"orcid": "0000-0003-0909-1255"
},
"_registered": true,
"_dependencies": [
{
"package": "R",
"version": ">= 3.5.0",
"role": "Depends"
},
{
"package": "dplyr",
"version": ">= 1.0.6",
"role": "Depends"
},
{
"package": "tibble",
"version": ">= 3.0.4",
"role": "Depends"
},
{
"package": "data.table",
"version": ">= 1.13.2",
"role": "Depends"
},
{
"package": "gtools",
"version": ">= 3.9",
"role": "Imports"
},
{
"package": "tidyr",
"version": ">= 1.1.3",
"role": "Imports"
},
{
"package": "fmsb",
"version": ">= 0.7.1",
"role": "Imports"
},
{
"package": "binhf",
"version": ">= 1.0.3",
"role": "Imports"
},
{
"package": "tidyselect",
"version": ">= 1.2.0",
"role": "Imports"
},
{
"package": "covr",
"role": "Suggests"
},
{
"package": "testthat",
"version": ">= 3.0.0",
"role": "Suggests"
}
],
"_owner": "ecologicaltools",
"_selfowned": true,
"_usedby": 0,
"_updates": [],
"_tags": [],
"_topics": [
"data-visualization",
"devtools",
"enzyme-activity",
"ibr",
"ibrv",
"indexes-ibr",
"integrated-biomarker-response",
"radarchart",
"rstudio-cloud",
"starplot"
],
"_stars": 4,
"_contributors": [
{
"user": "ecologicaltools",
"count": 76,
"uuid": 71520192
}
],
"_userbio": {
"uuid": 71520192,
"type": "user",
"name": "ecologicaltools"
},
"_downloads": {
"count": 234,
"source": "https://cranlogs.r-pkg.org/downloads/total/last-month/IBRtools"
},
"_devurl": "https://github.com/ecologicaltools/ibrtools",
"_searchresults": 2,
"_rbuild": "4.6.0",
"_assets": [
"extra/citation.cff",
"extra/citation.html",
"extra/citation.json",
"extra/citation.txt",
"extra/contents.json",
"extra/IBRtools.html",
"extra/NEWS.html",
"extra/NEWS.txt",
"extra/readme.html",
"extra/readme.md",
"manual.pdf"
],
"_homeurl": "https://github.com/ecologicaltools/ibrtools",
"_realowner": "ecologicaltools",
"_cranurl": true,
"_releases": [
{
"version": "0.1.2",
"date": "2022-12-22"
},
{
"version": "0.1.3",
"date": "2023-08-14"
}
],
"_exports": [
"ibr_chart",
"ibr_index",
"ibr_std",
"ibrv2_bdi",
"ibrv2_chart",
"ibrv2_index"
],
"_datasets": [
{
"name": "enzact",
"title": "Biomarkers activity values with different treatments",
"object": "enzact",
"class": [
"data.frame"
],
"fields": [
"treatment",
"biomarker1",
"biomarker2",
"biomarker3",
"biomarker4",
"biomarker5"
],
"rows": 28,
"table": true,
"tojson": true
},
{
"name": "enzact_coef",
"title": "Coefficient values for each biomarker within different treatments",
"object": "enzact_coef",
"class": [
"data.frame"
],
"fields": [
"treatment",
"biomarker1",
"biomarker2",
"biomarker3",
"biomarker4",
"biomarker5"
],
"rows": 1,
"table": true,
"tojson": true
},
{
"name": "enzact2",
"title": "Biomarkers activity values with different treatments",
"object": "enzact2",
"class": [
"data.frame"
],
"fields": [
"sites",
"biomarker1",
"biomarker2",
"biomarker3",
"biomarker4",
"biomarker5"
],
"rows": 38,
"table": true,
"tojson": true
}
],
"_help": [
{
"page": "enzact",
"title": "Biomarkers activity values with different treatments",
"topics": [
"enzact"
]
},
{
"page": "enzact_coef",
"title": "Coefficient values for each biomarker within different treatments",
"topics": [
"enzact_coef"
]
},
{
"page": "enzact2",
"title": "Biomarkers activity values with different treatments",
"topics": [
"enzact2"
]
},
{
"page": "ibr_chart",
"title": "IBR Radarchart",
"topics": [
"ibr_chart"
]
},
{
"page": "ibr_index",
"title": "IBR (Integrated Biomarker Response) index",
"topics": [
"ibr_index"
]
},
{
"page": "ibr_std",
"title": "Standardized values for IBR (Integrated Biomarker Response) index",
"topics": [
"ibr_std"
]
},
{
"page": "IBRtools",
"title": "'IBRtools': Integrating Biomarker-Based Assessments and Radarchart Creation",
"topics": [
"IBRtools"
]
},
{
"page": "ibrv2_bdi",
"title": "Standardized values for IBRv2 (Integrated Biological Responses version 2)",
"topics": [
"ibrv2_bdi"
]
},
{
"page": "ibrv2_chart",
"title": "IBRv2 Radarchart",
"topics": [
"ibrv2_chart"
]
},
{
"page": "ibrv2_index",
"title": "IBRv2 (Integrated Biological Responses version 2)",
"topics": [
"ibrv2_index"
]
}
],
"_readme": "https://github.com/ecologicaltools/ibrtools/raw/HEAD/README.md",
"_rundeps": [
"adlift",
"binhf",
"cli",
"cpp11",
"data.table",
"dplyr",
"EbayesThresh",
"fmsb",
"generics",
"glue",
"gtools",
"lifecycle",
"magrittr",
"MASS",
"pillar",
"pkgconfig",
"purrr",
"R6",
"rlang",
"stringi",
"stringr",
"tibble",
"tidyr",
"tidyselect",
"utf8",
"vctrs",
"wavethresh",
"withr"
],
"_score": 3.3010299956639813,
"_indexed": true,
"_nocasepkg": "ibrtools",
"_universes": [
"ecologicaltools"
],
"_binaries": [
{
"r": "4.7.0",
"os": "linux",
"version": "0.1.3",
"date": "2026-05-14T07:17:46.000Z",
"distro": "noble",
"commit": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"fileid": "810e3cdc6582f0371a85aeb362f0346dc125700475544f0bd480c6f3f1bd029b",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780"
},
{
"r": "4.6.0",
"os": "linux",
"version": "0.1.3",
"date": "2026-05-14T07:17:33.000Z",
"distro": "noble",
"commit": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"fileid": "52c3d97f6bef2669791081a8c7518fe0b238906f93aa5630fd98c30f3c448476",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780"
},
{
"r": "4.5.3",
"os": "mac",
"version": "0.1.3",
"date": "2026-05-15T05:46:08.000Z",
"commit": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"fileid": "61efa8b7c135da16f082eeabd0689d97f407ec17b759e632878fc3b6ed82f54f",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780"
},
{
"r": "4.6.0",
"os": "mac",
"version": "0.1.3",
"date": "2026-05-15T05:37:51.000Z",
"commit": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"fileid": "9ae907bfb017638d5dbf49445159ce527a0e218389c637719d66f5ca96616755",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780"
},
{
"r": "4.7.0",
"os": "win",
"version": "0.1.3",
"date": "2026-05-14T07:16:30.000Z",
"commit": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"fileid": "1f619db10482c2eadc1028157b0776d629f5c245d52c10583cec5d74d7ed1a7a",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780"
},
{
"r": "4.5.3",
"os": "win",
"version": "0.1.3",
"date": "2026-05-14T07:16:36.000Z",
"commit": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"fileid": "67f437e88f78b2fa4ab3dd1a3431790a4003d6d9bf95998a0cfe26fbf7ba302f",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780"
},
{
"r": "4.6.0",
"os": "win",
"version": "0.1.3",
"date": "2026-05-14T07:16:39.000Z",
"commit": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"fileid": "4b3837fe830c5bfa32896523ad7be3ebfcc9cbb974ce3d30c289c1b3561f29a6",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780"
},
{
"r": "4.6.0",
"os": "wasm",
"version": "0.1.3",
"date": "2026-05-22T08:39:52.000Z",
"commit": "1bd9e596ebe70c34f2e3139a97d1b34457d7d7d7",
"fileid": "6ca7324949a6819c946ee72a770974897439a4db322e15f691f2cd5302c3c456",
"status": "success",
"buildurl": "https://github.com/r-universe/ecologicaltools/actions/runs/25847158780"
}
]
}